Luise Häuser, Alexandros Stamatakis, Gerhard Jäger:
"Computational Approaches for Integrating out Subjectivity in Cognate Synonym Selection",
Accepted for publication in Proceedings of SCiL 2024 at UC Irvine, California, US, June 2024.
Josefin Stiller, Shaohong Feng, Al-Aabid Chowdhury, Iker Rivas-González, David A. Duchêne, Qi Fang, Yuan Deng, Alexey Kozlov,
Alexandros Stamatakis, Santiago Claramunt, Jacqueline M. T. Nguyen, Simon Y. W. Ho, Brant C. Faircloth, Julia Haag,
Peter Houde, Joel Cracraft, Metin Balaban, Uyen Mai, Guangji Chen, Rongsheng Gao, Chengran Zhou, Yulong Xie, Zijian Huang, Zhen Cao,
Zhi Yan, Huw A. Ogilvie, Luay Nakhleh, Bent Lindow, Benoit Morel, Jon Fjeldså, Peter A. Hosner, Rute R. da Fonseca, Bent Petersen,
Joseph A. Tobias, Tamás Székely, Jonathan David Kennedy, Andrew Hart Reeve, Andras Liker, Martin Stervander, Agostinho Antunes,
Dieter Thomas Tietze, Mads Bertelsen, Fumin Lei, Carsten Rahbek, Gary R. Graves, Mikkel H. Schierup, Tandy Warnow, Edward L. Braun,
M. Thomas P. Gilbert, Erich D. Jarvis, Siavash Mirarab, Guojie Zhang:
"Complexity of avian evolution revealed by family-level genomes"
Nature, 2024.
Alexey Kozlov, Alexandros Stamatakis: "EcoFreq: Compute with Cheaper, Cleaner Energy via Carbon-aware Power Scaling",
accepted for publication in Proceedings of ISC High Performance, Hamburg, May, 2024.
Anastasis Togkousidis, Alexey M. Kozlov, Julia Haag, Dimitri Höhler, Alexandros Stamatakis:
"Adaptive RAxML-NG: Accelerating Phylogenetic inference under Maximum Likelihood using dataset difficulty",
biorXiv preprint, 2023.
Tom A. Williams, Adrian A. Davin, Benoit Morel, Lenard L. Szantho, Anja Spang,
Alexandros Stamatakis, Philip Hugenholtz, Gergely J. Szollosi: "The power and limitations of species tree-aware phylogenetics",
biorXiv preprint, 2023.
Ben Bettisworth, Alexander I. Jordan, Alexandros Stamatakis:
"Phylourny: efficiently calculating elimination tournament win probabilities via phylogenetic methods",
open access, Statistics and Computing:33(80), 2023.